Pricing

Prices quoted are for Whitehead Institute/MIT only. In order to cover additional costs associated with providing outside service, non-WI/MIT institutions should add 30% to the list price.

Illumina Sequencing

There are two options for sequencing. The older GAII sequencers typically yield 20-30 million reads per lane. The new HiSeq typically yields 70-130 million reads per lane. Prices include sample quality control for one sample and basic data processing including base calls, quality scores and alignment. Sequencing pricing based on 7 samples per flow cell plus a control lane.

Item	Unit	Price Per Unit	Notes
GAII - 36 bp Single Read	Lane	$810	20-30 million reads
GAII - 36x36 Paired End	Lane	$1,450	20-30 million paired-end reads
GAII - Additional 36 bases	Lane	$300	Add to above base prices for longer reads
HiSeq - 40 bp Single Read	Lane	$1,060	70-130 million reads
HiSeq - 40x40 Paired End	Lane	$1,575	70-130 million paired end reads
HiSeq - 75x75 Paired End	Lane	$2,100	70-130 million paired end reads
HiSeq - 100x100 Paired End	Lane	$2,475	70-130 million paired end reads
HiSeq - Additional 40 bases	Lane	$300	Add to above base prices for longer reads
HiSeq2500 - 50 bp Single Read	Sample	$1,700	70-130 million reads
HiSeq2500 - 100x100 Paired End	Sample	$3,240	70-130 million paired end reads
HiSeq2500 - Additional 50 bases	Sample	$500	Add to above base prices for longer reads up to 150x150
HiSeq2500 - Add DUAL mode	Sample	$440	For running different samples in each lane
DNA-Seq Library prep Basic	Sample	$200	Automated protocol suitable for genomic DNA
DNA-Seq Library prep Premium	Sample	$275	Manual Protocol ideal for ChIP-seq and other low-input applications
RNA-Seq Library prep Basic	Sample	$200	Automated protocol, requires minimum 100ng total RNA, single stranded
RNA-Seq Library prep Premium	Sample	$275	Manual Protocol, uses Illumina "TruSeq" kits
RNA-Seq add RiboZero	Sample	$165	Uses Epicenter RiboZero kit instead of poly A mRNA isolation
RNA-Seq Library Prep	Sample	$350	Input is total RNA, uses Illumina TruSeq kit
Sample Multiplexing	Sample	$10	Mixing samples for multiplex run
Quality Control Only	Sample	$40	Bioanalyzer and qPCR

Microarray Services

Prices for sample processing do not include cost of arrays

Affymetrix Array Processing

Item	Unit	Price Per Unit	Notes
Affymetrix Gene ST or PrimeView arrays	Array	~$175	Array only
Affymetrix Genome (U133 or 430) 2.0	Array	~$400	Array only
Standard Expression Processing	Sample	~$500	all Affymetrix certified reagents
Prokaryotic Protocol	Sample	~$450	-

Agilent Array Processing

Item	Unit	Price Per Unit	Notes
4x44k multiplex Arrays	Slide (array)	~$700/slide($175/array)	Arrays only - 4 arrays per slide
8x60k multiplex Arrays	Slide (array)	~$1,300/slide($162/array)	Arrays only - 8 arrays per slide
Standard Expression Processing	Sample	~$350	One sample, single channel
ChIP-on-Chip/CGH Processing	Sample	~$500	Two samples, dual channel

nCounter Analysis System (NanoString)

Item	Unit	Price Per Unit	Notes
Equipment Use	Cartridge	$190	12 samples per cartridge
Reagents	Sample	$23.00*	*Does NOT include CodeSet
Labor	Cartridge	$105.00	-

Bioanalyzer - RNA, DNA and Protein analysis

Item	Unit	Price Per Unit	Notes
RNA or DNA	Sample	$15	Pico, Nano, DNA or hsDNA

Quantitative PCR - ABI 7900

Item	Unit	Price Per Unit	Notes
SYBR green / Taq Man Master mix	uL	6.5 cents	-
Optical Plate	Plate	$7.00	-
Equipment Time (2 hour time block)	Plate	$30.00	Sign-up Required

Highthroughput Screening - Cellomics

Item	Unit	Price Per Unit	Notes
Equipment Time (Internal)	Hourly	$25.00	Sign-up Required
Equipment Time (External)	Hourly	$75.00	Sign-up Required