Pricing
Prices quoted are for Whitehead Institute/MIT only. In order to cover additional costs associated with providing outside service, non-WI/MIT institutions should add 30% to the list price.
Contents
Illumina Sequencing
There are two options for Illumina sequencing. HiSeq "Standard" and HiSeq "Rapid".
Prices include basic data processing including base calls, quality scores and alignment (if requested).
Please visit the Sequencing Services page for sample submission instructions and more information about library prep services.
NovaSeq
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| NovaSeqSP - 100bp Single Read OR 50x50bp Paired End | Lane | $1,770 | Around 325 Million or more Reads Per Lane |
| NovaSeqSP - 300bp Single Read OR 150x150bp Paired End | Lane | $2,775 | Around 325 Million or more Reads Per Lane |
| NovaSeqSP - 500bp Single Read OR 250x250bp Paired End | Lane | $3,810 | Around 325 Million or more Reads Per Lane |
| NovaSeqS1 - 100bp Single Read OR 50x50bp Paired End | Lane | $2,790 | Around 650 Million or more Reads Per Lane |
| NovaSeqS1 - 200bp Single Read OR 100x100bp Paired End | Lane | $3,630 | Around 650 Million or more Reads Per Lane |
| NovaSeqS1 - 300bp Single Read OR 150x150bp Paired End | Lane | $4,305 | Around 650 Million or more Reads Per Lane |
| NovaSeqS2 - 100bp Single Read OR 50x50bp Paired End | Lane | $5,725 | Around 1.6 Billion or more Reads Per Lane |
| NovaSeqS2 - 200bp Single Read OR 100x100bp Paired End | Lane | $7,720 | Around 1.6 Billion or more Reads Per Lane |
| NovaSeqS2 - 300bp Single Read OR 150x150bp Paired End | Lane | $9,030 | Around 1.6 Billion or more Reads Per Lane |
| NovaSeqS4 - 300bp Single Read OR 150x150bp Paired End | full flowcell (4 lanes) | Contact Us | Around 2 Billion or more Reads Per Lane |
HiSeq (Std a.k.a. "High Output" mode) -- At least 150-200 million reads per lane
Standard mode require 7 full lanes of samples before sequencing can proceed and takes about 1 day for every 25 bases of read length. Note: You do not need to fill out a full flow cell yourself, we will group you with other samples to fill out a run.
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| HiSeq - 50 bp Single Read | Lane | $1,200 | |
| HiSeq - 28x40 10X | Lane | $1,500 | ONLY FOR 10X LIBRARIES |
| HiSeq - 60x60 Paired End | Lane | $1,750 | |
| HiSeq - 100x100 Paired End | Lane | $2,250 | |
| HiSeq - Additional 70 bases | Lane | $400 | Add to above base prices for longer reads |
HiSeq (Rapid) -- At least 100 to 150 million reads per lane (Two lanes per Flow Cell)
In "Rapid" mode, individual samples can be sequenced much more quickly without the need to fill out full flow cells. Read lengths in Rapid mode are also longer, up to 250x250, and complete more quickly. For example - a 100x100 run in Rapid mode completes in 2-3 days vs up to 7 days in Standard mode.
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| HiSeqRapid - 50 bp Single Read | full flowcell (2 lanes) | $2,300 | |
| HiSeqRapid - 28x40 10X | full flowcell (2 lanes) | $2,800 | ONLY FOR 10X LIBRARIES |
| HiSeqRapid - 60x60 Paired End | full flowcell (2 lanes) | $3,400 | |
| HiSeqRapid - 100x100 Paired End | full flowcell (2 lanes) | $4,350 | |
| HiSeqRapid - 250x250 Paired End | full flowcell (2 lanes) | $7,200 | |
| HiSeqRapid - Add DUAL mode | full flowcell (2 lanes) | $460 | ONLY required if running different samples in each lane |
| HiSeqRapid - Additional 70 bases | full flowcell (2 lanes) | $560 | Add to above base prices for longer reads up to 250x250 |
Library Prep
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| Swift ChIP DNA (ChIP-Seq) | Sample | $200 | Optimized for low input ChIP |
| TruSeq Nano gDNA (Genomic) | Sample | $200 | Genomic DNA >100ng |
| Nextera gDNA (Genomic, ATAC-Seq) | Sample | $200 | "Tagmentation" prep from intact gDNA (50ng) |
| KAPA Hyper Prep - Stranded (RNA-Seq) | Sample | $200 | |
| KAPA Ribo Erase (RNA-Seq) | Sample | $250 | |
| Clontech UltraLow RNA (RNA-Seq) | Sample | $300 | For low input RNA down to single cell |
| Clontech Stranded Total RNA Pico (RNA-Seq) | Sample | $250 | - |
| NEBNext Small RNA (microRNA) | Sample | $200 | - |
| 10X Single Cell 3’ Solution Library prep (RNA-Seq) | Sample | $2,000 | Sorting and library prep for up to 10,000 cells |
| SMART-seq v2 Library prep (RNA-Seq) | 96-well Plate | $2,500 |
| Click here for more info about Library Prep options |
Quality Control
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| Bioanalyzer | Sample | $15 | Sizing and purity analysis |
| qPCR | Sample | $25 | Quantification |
| Sample Multiplexing | Sample | $10 | Mixing samples for multiplex run |
nCounter Analysis System (NanoString)
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| Reagents | Cartridge | ---- | Reagents and Codesets Purchase From Nanostring |
| Equipment Use | Cartridge | $250 | 12 samples per cartridge |
| Labor-Hyb | Cartridge | $150 | - |
| Labor-miRNA | Sample | $25 | Addon for miRNA protocol only |
Bioanalyzer - RNA, DNA and Protein analysis
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| RNA or DNA | Sample | $15 | Pico, Nano, DNA or hsDNA |
Quantitative PCR - QuantStudio 6
| Item | Unit | Price Per Unit | Notes |
|---|---|---|---|
| SYBR green / Taq Man Master mix | uL | 7 cents | - |
| Optical Plate | Plate | $7 | - |
| Equipment Time (2 hour time block) | Plate | $30 | Sign-up Required |
